Open Source Software Tools

  • PubHarvester: An open-source software tool designed to retrieve scientific publications data from MEDLINE.
  • SC/Gen: An open-source software tool to create the coauthorship network for a set of focal scientists.
  • Scientific Distance: An open-source software tool designed to calculate distance between any pair of scientists in "ideas space" based on the overlap of the MeSH keywords in their publications.
  • FindRelated: An open-source software tool designed to harvest efficiently the set of articles returned by the PubMed Related Citation algorithm, for any given set of PubMed identifiers (pmid’s) provided as an input.